Bibliotecas PUC-SP - Busca Integrada

Review of MrsFreqPhase methods: methods designed to estimate statistically malaria parasite multiplicity of infection, relatedness, frequency and phase

por Aimee R. Taylor, Eric Neubauer Vickers, Bryan Greenhouse
Publicado en Malaria Journal (2024-10-01)

Probabilistic classification of late treatment failure in uncomplicated falciparum malaria

por Somya Mehra, Aimee R. Taylor, Mallika Imwong, Nicholas J. White, James A. Watson
Publicado en Nature Communications (2025-11-01)

hmmIBD: software to infer pairwise identity by descent between haploid genotypes

por Stephen F. Schaffner, Aimee R. Taylor, Wesley Wong, Dyann F. Wirth, Daniel E. Neafsey
Publicado en Malaria Journal (2018-05-01)

Identity-by-descent with uncertainty characterises connectivity of Plasmodium falciparum populations on the Colombian-Pacific coast.

por Aimee R Taylor, Diego F Echeverry, Timothy J C Anderson, Daniel E Neafsey, Caroline O Buckee
Publicado en PLoS Genetics (2020-11-01)

A cautionary note on the use of unsupervised machine learning algorithms to characterise malaria parasite population structure from genetic distance matrices.

por James A Watson, Aimee R Taylor, Elizabeth A Ashley, Arjen Dondorp, Caroline O Buckee, Nicholas J White, Chris C Holmes
Publicado en PLoS Genetics (2020-10-01)

Mapping malaria by combining parasite genomic and epidemiologic data

por Amy Wesolowski, Aimee R Taylor, Hsiao-Han Chang, Robert Verity, Sofonias Tessema, Jeffrey A Bailey, T Alex Perkins, Daniel E Neafsey, Bryan Greenhouse, Caroline O Buckee
Publicado en BMC Medicine (2018-10-01)

Correction to: Mapping malaria by combining parasite genomic and epidemiologic data

por Amy Wesolowski, Aimee R. Taylor, Hsiao-Han Chang, Robert Verity, Sofonias Tessema, Jeffrey A. Bailey, T. Alex Perkins, Daniel E. Neafsey, Bryan Greenhouse, Caroline O. Buckee
Publicado en BMC Medicine (2018-12-01)

Quantifying connectivity between local Plasmodium falciparum malaria parasite populations using identity by descent.

por Aimee R Taylor, Stephen F Schaffner, Gustavo C Cerqueira, Standwell C Nkhoma, Timothy J C Anderson, Kanlaya Sriprawat, Aung Pyae Phyo, François Nosten, Daniel E Neafsey, Caroline O Buckee
Publicado en PLoS Genetics (2017-10-01)

Resolving the cause of recurrent Plasmodium vivax malaria probabilistically

por Aimee R. Taylor, James A. Watson, Cindy S. Chu, Kanokpich Puaprasert, Jureeporn Duanguppama, Nicholas P. J. Day, Francois Nosten, Daniel E. Neafsey, Caroline O. Buckee, Mallika Imwong, Nicholas J. White
Publicado en Nature Communications (2019-12-01)

Using serological diagnostics to characterize remaining high-incidence pockets of malaria in forest-fringe Cambodia

por Mathilde Grimée, Costanza Tacoli, Mirco Sandfort, Thomas Obadia, Aimee R. Taylor, Amélie Vantaux, Leanne J. Robinson, Dysoley Lek, Rhea J. Longley, Ivo Mueller, Jean Popovici, Michael T. White, Benoît Witkowski
Publicado en Malaria Journal (2024-02-01)

A molecular barcode to inform the geographical origin and transmission dynamics of Plasmodium vivax malaria.

por Ernest Diez Benavente, Monica Campos, Jody Phelan, Debbie Nolder, Jamille G Dombrowski, Claudio R F Marinho, Kanlaya Sriprawat, Aimee R Taylor, James Watson, Cally Roper, Francois Nosten, Colin J Sutherland, Susana Campino, Taane G Clark
Publicado en PLoS Genetics (2020-02-01)

Resolving drug selection and migration in an inbred South American Plasmodium falciparum population with identity-by-descent analysis.

por Manuela Carrasquilla, Angela M Early, Aimee R Taylor, Angélica Knudson Ospina, Diego F Echeverry, Timothy J C Anderson, Elvira Mancilla, Samanda Aponte, Pablo Cárdenas, Caroline O Buckee, Julian C Rayner, Fabián E Sáenz, Daniel E Neafsey, Vladimir Corredor
Publicado en PLoS Pathogens (2022-12-01)

Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites

por Sasha V. Siegel, Hidayat Trimarsanto, Roberto Amato, Kathryn Murie, Aimee R. Taylor, Edwin Sutanto, Mariana Kleinecke, Georgia Whitton, James A. Watson, Mallika Imwong, Ashenafi Assefa, Awab Ghulam Rahim, Hoang Chau Nguyen, Tinh Hien Tran, Justin A. Green, Gavin C. K. W. Koh, Nicholas J. White, Nicholas Day, Dominic P. Kwiatkowski, Julian C. Rayner, Ric N. Price, Sarah Auburn
Publicado en Nature Communications (2024-08-01)

Microhaplotype deep sequencing assays to capture Plasmodium vivax infection lineages

por Mariana Kleinecke, Edwin Sutanto, Angela Rumaseb, Kian Soon Hoon, Hidayat Trimarsanto, Ashley Osborne, Paulo Manrique, Trent Peters, David Hawkes, Ernest Diez Benavente, Georgia Whitton, Sasha V. Siegel, Richard D. Pearson, Roberto Amato, Anjana Rai, Nguyen Thanh Thuy Nhien, Hoang Chau Nguyen, Ashenafi Assefa, Tamiru S. Degaga, Dagimawie Tadesse Abate, Awab Ghulam Rahim, Ayodhia Pitaloka Pasaribu, Inge Sutanto, Mohammad Shafiul Alam, Zuleima Pava, Tatiana Lopera-Mesa, Diego Echeverry, Tim William, Nicholas M. Anstey, Matthew J. Grigg, Nicholas P. Day, Nicholas J. White, Dominic P. Kwiatkowski, Aimee R. Taylor, Rintis Noviyanti, Daniel Neafsey, Ric N. Price, Sarah Auburn
Publicado en Nature Communications (2025-08-01)