Bibliotecas PUC-SP - Busca Integrada

Computational Evaluation of the Strict Master and Random Template Models of Endogenous Retrovirus Evolution.

Por Fabrícia F Nascimento, Allen G Rodrigo
Publicado no PLoS ONE (2016-01-01)

On the Use of Bootstrapped Topologies in Coalescent-Based Bayesian MCMC Inference: A Comparison of Estimation and Computational Efficiencies

Por Allen G. Rodrigo, Peter Tsai, Helen Shearman
Publicado no Evolutionary Bioinformatics (2009-01-01)

Covariation of branch lengths in phylogenies of functionally related genes.

Por Wai Lok Sibon Li, Allen G Rodrigo
Publicado no PLoS ONE (2009-12-01)

On the Use of Bootstrapped Topologies in Coalescent-Based Bayesian MCMC Inference: A Comparison of Estimation and Computational Efficiencies

Por Allen G. Rodrigo, Peter Tsai, Helen Shearman
Publicado no Evolutionary Bioinformatics (2009-07-01)

On the Use of Bootstrapped Topologies in Coalescent-Based Bayesian McMc Inference: A Comparison of Estimation and Computational Efficiencies

Por Allen G. Rodrigo, Peter Tsai, Helen Shearman
Publicado no Evolutionary Bioinformatics (2009-01-01)

Correction to: Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage

Por Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo
Publicado no BMC Bioinformatics (2020-01-01)

Reassembling haplotypes in a mixture of pooled amplicons when the relative concentrations are known: A proof-of-concept study on the efficient design of next-generation sequencing...

Por Louis Ranjard, Thomas K F Wong, Allen G Rodrigo
Publicado no PLoS ONE (2018-01-01)

Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage

Por Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo
Publicado no BMC Bioinformatics (2019-12-01)

HaploJuice : accurate haplotype assembly from a pool of sequences with known relative concentrations

Por Thomas K. F. Wong, Louis Ranjard, Yu Lin, Allen G. Rodrigo
Publicado no BMC Bioinformatics (2018-10-01)

A digital DNA system favours the superiority of unidirectional inheritance over 'Lamarckian' inheritance.

Por Aswathi Shiju, Samantha D M Arras, Allen G Rodrigo, Anthony M Poole
Publicado no PLoS Computational Biology (2025-10-01)

Mugen-UMAP: UMAP visualization and clustering of mutated genes in single-cell DNA sequencing data

Por Teng Li, Yiran Zou, Xianghan Li, Thomas K. F. Wong, Allen G. Rodrigo
Publicado no BMC Bioinformatics (2024-09-01)

A statistical model to identify differentially expressed proteins in 2D PAGE gels.

Por Steven H Wu, Michael A Black, Robyn A North, Kelly R Atkinson, Allen G Rodrigo
Publicado no PLoS Computational Biology (2009-09-01)

An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes.

Por Thomas K F Wong, Teng Li, Louis Ranjard, Steven H Wu, Jeet Sukumaran, Allen G Rodrigo
Publicado no PLoS Computational Biology (2021-09-01)

Sources of variation in ancestral sequence reconstruction for HIV-1 envelope genes

Por James I. Mullins, Allen G. Rodrigo, Mark A. Jensen, Laura Heath, Yi Liu, David C. Nickle, Howard A. Ross
Publicado no Evolutionary Bioinformatics (2006-01-01)

Sources of Variation in Ancestral Sequence Reconstruction for HIV-1 Envelope Genes

Por Howard A. Ross, David C. Nickle, Yi Liu, Laura Heath, Mark A. Jensen, Allen G. Rodrigo, James I. Mullins
Publicado no Evolutionary Bioinformatics (2006-01-01)

Complete mitochondrial genome of the green-lipped mussel, Perna canaliculus (Mollusca: Mytiloidea), from long nanopore sequencing reads

Por Louis Ranjard, Thomas K. F. Wong, Carsten Külheim, Allen G. Rodrigo, Norman L. C. Ragg, Selina Patel, Brendon J. Dunphy
Publicado no Mitochondrial DNA. Part B. Resources (2018-01-01)

HIV-1 transmission during early antiretroviral therapy: evaluation of two HIV-1 transmission events in the HPTN 052 prevention study.

Por Li-Hua Ping, Cassandra B Jabara, Allen G Rodrigo, Sarah E Hudelson, Estelle Piwowar-Manning, Lei Wang, Susan H Eshleman, Myron S Cohen, Ronald Swanstrom
Publicado no PLoS ONE (2013-01-01)