Bibliotecas PUC-SP - Busca Integrada

ConPADE: genome assembly ploidy estimation from next-generation sequencing data.

per Gabriel R A Margarido, David Heckerman
Publicat a PLoS Computational Biology (2015-04-01)

Leveraging hierarchical population structure in discrete association studies.

per Jonathan Carlson, Carl Kadie, Simon Mallal, David Heckerman
Publicat a PLoS ONE (2007-01-01)

Conditional random fields for fast, large-scale genome-wide association studies.

per Jim C Huang, Christopher Meek, Carl Kadie, David Heckerman
Publicat a PLoS ONE (2011-01-01)

A statistical framework for modeling HLA-dependent T cell response data.

per Jennifer Listgarten, Nicole Frahm, Carl Kadie, Christian Brander, David Heckerman
Publicat a PLoS Computational Biology (2007-10-01)

Learning transcriptional regulatory relationships using sparse graphical models.

per Xiang Zhang, Wei Cheng, Jennifer Listgarten, Carl Kadie, Shunping Huang, Wei Wang, David Heckerman
Publicat a PLoS ONE (2012-01-01)

Improved learning in U.S. history and decision competence with decision-focused curriculum.

per David Jacobson, Andrew Parker, Chris Spetzler, Wandi Bruine de Bruin, Keith Hollenbeck, David Heckerman, Baruch Fischhoff
Publicat a PLoS ONE (2012-01-01)

Statistical resolution of ambiguous HLA typing data.

per Jennifer Listgarten, Zabrina Brumme, Carl Kadie, Gao Xiaojiang, Bruce Walker, Mary Carrington, Philip Goulder, David Heckerman
Publicat a PLoS Computational Biology (2008-02-01)

Ranking of non-coding pathogenic variants and putative essential regions of the human genome

per Alex Wells, David Heckerman, Ali Torkamani, Li Yin, Jonathan Sebat, Bing Ren, Amalio Telenti, Julia di Iulio
Publicat a Nature Communications (2019-11-01)

Comparison of immunogen designs that optimize peptide coverage: reply to Fischer et al.

per David C Nickle, Nebojsa Jojic, David Heckerman, Vladimir Jojic, Darko Kirovski, Morgane Rolland, Sergei Kosakovsky Pond, James I Mullins
Publicat a PLoS Computational Biology (2008-01-01)

Correction: Comparison of Immunogen Designs That Optimize Peptide Coverage: Reply to Fischer et al.

per David C Nickle, Nebojsa Jojic, David Heckerman, Vladimir Jojic, Darko Kirovski, Morgane Rolland, Sergei Kosakovsky Pond, James I Mullins
Publicat a PLoS Computational Biology (2008-03-01)

Anti-hepatitis C virus T-cell immunity in the context of multiple exposures to the virus.

per Katja Pfafferott, Pooja Deshpande, Elizabeth McKinnon, Shahzma Merani, Andrew Lucas, David Heckerman, Simon Mallal, Mina John, Silvana Gaudieri, Michaela Lucas
Publicat a PLoS ONE (2015-01-01)

Coping with viral diversity in HIV vaccine design.

per David C Nickle, Morgane Rolland, Mark A Jensen, Sergei L Kosakovsky Pond, Wenjie Deng, Mark Seligman, David Heckerman, James I Mullins, Nebojsa Jojic
Publicat a PLoS Computational Biology (2007-04-01)

Broad and Gag-biased HIV-1 epitope repertoires are associated with lower viral loads.

per Morgane Rolland, David Heckerman, Wenjie Deng, Christine M Rousseau, Hoosen Coovadia, Karen Bishop, Philip J R Goulder, Bruce D Walker, Christian Brander, James I Mullins
Publicat a PLoS ONE (2008-01-01)

Recognition of HIV-1 peptides by host CTL is related to HIV-1 similarity to human proteins.

per Morgane Rolland, David C Nickle, Wenjie Deng, Nicole Frahm, Christian Brander, Gerald H Learn, David Heckerman, Nebosja Jojic, Vladimir Jojic, Bruce D Walker, James I Mullins
Publicat a PLoS ONE (2007-09-01)

Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag.

per Jonathan M Carlson, Zabrina L Brumme, Christine M Rousseau, Chanson J Brumme, Philippa Matthews, Carl Kadie, James I Mullins, Bruce D Walker, P Richard Harrigan, Philip J R Goulder, David Heckerman
Publicat a PLoS Computational Biology (2008-11-01)

Nef-specific CD8+ T cell responses contribute to HIV-1 immune control.

per Emily Adland, Jonathan M Carlson, Paolo Paioni, Henrik Kløverpris, Roger Shapiro, Anthony Ogwu, Lynn Riddell, Graz Luzzi, Fabian Chen, Thambiah Balachandran, David Heckerman, Anette Stryhn, Anne Edwards, Thumbi Ndung'u, Bruce D Walker, Søren Buus, Philip Goulder, Philippa C Matthews
Publicat a PLoS ONE (2013-01-01)

Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1.

per Zabrina L Brumme, Chanson J Brumme, David Heckerman, Bette T Korber, Marcus Daniels, Jonathan Carlson, Carl Kadie, Tanmoy Bhattacharya, Celia Chui, James Szinger, Theresa Mo, Robert S Hogg, Julio S G Montaner, Nicole Frahm, Christian Brander, Bruce D Walker, P Richard Harrigan
Publicat a PLoS Pathogens (2007-07-01)

Co-operative additive effects between HLA alleles in control of HIV-1.

per Philippa C Matthews, Jennifer Listgarten, Jonathan M Carlson, Rebecca Payne, Kuan-Hsiang Gary Huang, John Frater, Dominique Goedhals, Dewald Steyn, Cloete van Vuuren, Paolo Paioni, Pieter Jooste, Anthony Ogwu, Roger Shapiro, Zenele Mncube, Thumbi Ndung'u, Bruce D Walker, David Heckerman, Philip J R Goulder
Publicat a PLoS ONE (2012-01-01)

Role of transmitted Gag CTL polymorphisms in defining replicative capacity and early HIV-1 pathogenesis.

per Jessica L Prince, Daniel T Claiborne, Jonathan M Carlson, Malinda Schaefer, Tianwei Yu, Shabir Lahki, Heather A Prentice, Ling Yue, Sundaram A Vishwanathan, William Kilembe, Paul Goepfert, Matthew A Price, Jill Gilmour, Joseph Mulenga, Paul Farmer, Cynthia A Derdeyn, Jiaming Tang, David Heckerman, Richard A Kaslow, Susan A Allen, Eric Hunter
Publicat a PLoS Pathogens (2012-01-01)

HIV-1 p24(gag) derived conserved element DNA vaccine increases the breadth of immune response in mice.

per Viraj Kulkarni, Margherita Rosati, Antonio Valentin, Brunda Ganneru, Ashish K Singh, Jian Yan, Morgane Rolland, Candido Alicea, Rachel Kelly Beach, Gen-Mu Zhang, Sylvie Le Gall, Kate E Broderick, Niranjan Y Sardesai, David Heckerman, Beatriz Mothe, Christian Brander, David B Weiner, James I Mullins, George N Pavlakis, Barbara K Felber
Publicat a PLoS ONE (2013-01-01)