Bibliotecas PUC-SP - Busca Integrada

NuChart: an R package to study gene spatial neighbourhoods with multi-omics annotations.

von Ivan Merelli, Pietro Liò, Luciano Milanesi
Veröffentlicht in PLoS ONE (2013-01-01)

DnaK as Antibiotic Target: Hot Spot Residues Analysis for Differential Inhibition of the Bacterial Protein in Comparison with the Human HSP70.

von Federica Chiappori, Marco Fumian, Luciano Milanesi, Ivan Merelli
Veröffentlicht in PLoS ONE (2015-01-01)

Hardware and Software Solutions for Energy-Efficient Computing in Scientific Programming

von Daniele D’Agostino, Ivan Merelli, Marco Aldinucci, Daniele Cesini
Veröffentlicht 2021-01-01

Advantages of using graph databases to explore chromatin conformation capture experiments

von Daniele D’Agostino, Pietro Liò, Marco Aldinucci, Ivan Merelli
Veröffentlicht in BMC Bioinformatics (2021-04-01)

Managing, Analysing, and Integrating Big Data in Medical Bioinformatics: Open Problems and Future Perspectives

von Ivan Merelli, Horacio Pérez-Sánchez, Sandra Gesing, Daniele D’Agostino
Veröffentlicht 2014-01-01

The genome conformation as an integrator of multi-omic data: the example of damage spreading in cancer

von Fabio Tordini, Marco Aldinucci, Luciano Milanesi, Pietro Liò, Ivan Merelli
Veröffentlicht in Frontiers in Genetics (2016-11-01)

Integration of Multiple Resolution Data in 3D Chromatin Reconstruction Using <i>ChromStruct</i>

von Claudia Caudai, Monica Zoppè, Anna Tonazzini, Ivan Merelli, Emanuele Salerno
Veröffentlicht in Biology (2021-04-01)

Molecular mechanism of allosteric communication in Hsp70 revealed by molecular dynamics simulations.

von Federica Chiappori, Ivan Merelli, Giorgio Colombo, Luciano Milanesi, Giulia Morra
Veröffentlicht in PLoS Computational Biology (2012-01-01)

Protocol to differentiate monolayer human induced pluripotent stem cells into inflammatory responsive astrocytes

von Anna Maria Sole Giordano, Monah Abou Alezz, Ivan Merelli, Anna Kajaste-Rudnitski
Veröffentlicht in STAR Protocols (2023-03-01)

VISPA2: a scalable pipeline for high-throughput identification and annotation of vector integration sites

von Giulio Spinozzi, Andrea Calabria, Stefano Brasca, Stefano Beretta, Ivan Merelli, Luciano Milanesi, Eugenio Montini
Veröffentlicht in BMC Bioinformatics (2017-11-01)

Cloud Infrastructures for In Silico Drug Discovery: Economic and Practical Aspects

von Daniele D'Agostino, Andrea Clematis, Alfonso Quarati, Daniele Cesini, Federica Chiappori, Luciano Milanesi, Ivan Merelli
Veröffentlicht 2013-01-01

Parallel Solutions for Voxel-Based Simulations of Reaction-Diffusion Systems

von Daniele D’Agostino, Giulia Pasquale, Andrea Clematis, Carlo Maj, Ettore Mosca, Luciano Milanesi, Ivan Merelli
Veröffentlicht 2014-01-01

Selected papers from the 15th and 16th international conference on Computational Intelligence Methods for Bioinformatics and Biostatistics

von Paolo Cazzaniga, Maria Raposo, Daniela Besozzi, Ivan Merelli, Antonino Staiano, Angelo Ciaramella, Riccardo Rizzo, Luca Manzoni
Veröffentlicht in BMC Bioinformatics (2021-04-01)

A Scalable Genetic Programming Approach to Integrate miRNA-Target Predictions: Comparing Different Parallel Implementations of M3GP

von Stefano Beretta, Mauro Castelli, Luis Muñoz, Leonardo Trujillo, Yuliana Martínez, Aleš Popovič, Luciano Milanesi, Ivan Merelli
Veröffentlicht in Complexity (2018-01-01)

GenHap: a novel computational method based on genetic algorithms for haplotype assembly

von Andrea Tangherloni, Simone Spolaor, Leonardo Rundo, Marco S. Nobile, Paolo Cazzaniga, Giancarlo Mauri, Pietro Liò, Ivan Merelli, Daniela Besozzi
Veröffentlicht in BMC Bioinformatics (2019-04-01)

Cystic Fibrosis Defective Response to Infection Involves Autophagy and Lipid Metabolism

von Alessandra Mingione, Emerenziana Ottaviano, Matteo Barcella, Ivan Merelli, Lorenzo Rosso, Tatiana Armeni, Natalia Cirilli, Riccardo Ghidoni, Elisa Borghi, Paola Signorelli
Veröffentlicht in Cells (2020-08-01)

Human iPSC-derived neural stem cells displaying radial glia signature exhibit long-term safety in mice

von Marco Luciani, Chiara Garsia, Stefano Beretta, Ingrid Cifola, Clelia Peano, Ivan Merelli, Luca Petiti, Annarita Miccio, Vasco Meneghini, Angela Gritti
Veröffentlicht in Nature Communications (2024-11-01)

Integration of Machine Learning Methods to Dissect Genetically Imputed Transcriptomic Profiles in Alzheimer’s Disease

von Carlo Maj, Tiago Azevedo, Valentina Giansanti, Oleg Borisov, Giovanna Maria Dimitri, Simeon Spasov, Alzheimer’s Disease Neuroimaging Initiative, Pietro Lió, Ivan Merelli
Veröffentlicht in Frontiers in Genetics (2019-09-01)

S255: CELLULAR SENESCENCE AND INFLAMMATORY PROGRAMS ARE UNINTENDED CONSEQUENCES OF CRISPR-CAS9 GENE EDITING IN HEMATOPOIETIC STEM AND PROGENITOR CELLS

von Anastasia Conti, Teresa Tavella, Rosaria De Marco, Federico Midena, Samuele Ferrari, Stefano Beretta, Chiara Brombin, Ivan Merelli, Luigi Naldini, Raffaella DI Micco
Veröffentlicht in HemaSphere (2023-08-01)

P436: CUTTING-EDGE TRANSCRIPTOMICS TO IDENTIFY LEUKEMIA-INTRINSIC AND -EXTRINSIC CORRELATES OF IMMUNE ESCAPE AND POST-TRANSPLANTATION RELAPSE

von Pier Edoardo Rovatti, Marco Punta, Matteo Maria Naldini, Matteo Barcella, Laura Zito, Matteo Giovanni Carrabba, Massimo Bernardi, Jacopo Peccatori, Ivan Merelli, Bernhard Gentner, Fabio Ciceri, Luca Vago, Cristina Toffalori
Veröffentlicht in HemaSphere (2023-08-01)