Bibliotecas PUC-SP - Busca Integrada

System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris

Por Ali Navid, Yongqin Jiao, Sergio Ernesto Wong, Jennifer Pett-Ridge
Publicado no BMC Bioinformatics (2019-05-01)

Phylogenetic patterns in the microbial response to resource availability: amino acid incorporation in San Francisco Bay.

Por Xavier Mayali, Peter K Weber, Shalini Mabery, Jennifer Pett-Ridge
Publicado no PLoS ONE (2014-01-01)

Measuring Cyanobacterial Metabolism in Biofilms with NanoSIMS Isotope Imaging and Scanning Electron Microscopy (SEM)

Por Rhona Stuart, Xavier Mayali, Michael Thelen, Jennifer Pett-Ridge, Peter Weber
Publicado no Bio-Protocol (2017-05-01)

The Switchgrass Microbiome: A Review of Structure, Function, and Taxonomic Distribution

Por Rachel Hestrin, Marissa R. Lee, Briana K. Whitaker, Jennifer Pett-Ridge
Publicado no Phytobiomes Journal (2021-03-01)

Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development

Por Ella T. Sieradzki, Erin E. Nuccio, Jennifer Pett-Ridge, Mary K. Firestone
Publicado no mSystems (2023-10-01)

Managing Plant Microbiomes for Sustainable Biofuel Production

Por Kateryna Zhalnina, Christine Hawkes, Ashley Shade, Mary K. Firestone, Jennifer Pett-Ridge
Publicado no Phytobiomes Journal (2021-05-01)

Proteomic Stable Isotope Probing Reveals Taxonomically Distinct Patterns in Amino Acid Assimilation by Coastal Marine Bacterioplankton

Por Samuel Bryson, Zhou Li, Jennifer Pett-Ridge, Robert L. Hettich, Xavier Mayali, Chongle Pan, Ryan S. Mueller
Publicado no mSystems (2016-04-01)

Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches

Por Mengting Maggie Yuan, Anne Kakouridis, Evan Starr, Nhu Nguyen, Shengjing Shi, Jennifer Pett-Ridge, Erin Nuccio, Jizhong Zhou, Mary Firestone
Publicado no mBio (2021-04-01)

Quantifying the effects of switchgrass (Panicum virgatum) on deep organic C stocks using natural abundance 14C in three marginal soils

Por Eric W. Slessarev, Erin E. Nuccio, Karis J. McFarlane, Christina E. Ramon, Malay Saha, Mary K. Firestone, Jennifer Pett‐Ridge
Publicado no GCB Bioenergy (2020-10-01)

VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature

Por Olivier Zablocki, Michelle Michelsen, Marie Burris, Natalie Solonenko, Joanna Warwick-Dugdale, Romik Ghosh, Jennifer Pett-Ridge, Matthew B. Sullivan, Ben Temperton
Publicado no PeerJ (2021-03-01)

A subset of viruses thrives following microbial resuscitation during rewetting of a seasonally dry California grassland soil

Por Alexa M. Nicolas, Ella T. Sieradzki, Jennifer Pett-Ridge, Jillian F. Banfield, Michiko E. Taga, Mary K. Firestone, Steven J. Blazewicz
Publicado no Nature Communications (2023-09-01)

Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat.

Por Jackson Z Lee, R Craig Everroad, Ulas Karaoz, Angela M Detweiler, Jennifer Pett-Ridge, Peter K Weber, Leslie Prufert-Bebout, Brad M Bebout
Publicado no PLoS ONE (2018-01-01)

Melanization slows the rapid movement of fungal necromass carbon and nitrogen into both bacterial and fungal decomposer communities and soils

Por François Maillard, Talia J. Michaud, Craig R. See, Lang C. DeLancey, Steven J. Blazewicz, Jeffrey A. Kimbrel, Jennifer Pett-Ridge, Peter G. Kennedy
Publicado no mSystems (2023-08-01)

Quantitative stable isotope probing (qSIP) and cross-domain networks reveal bacterial-fungal interactions in the hyphosphere

Por Giovana S. Slanzon, Mengting Yuan, Katerina Estera-Molina, Aaron Chew, Steve J. Blazewicz, Michael Allen, Mary K. Firestone, Jennifer Pett-Ridge, Nhu H. Nguyen
Publicado no Microbiome (2025-04-01)

Characterizing Chemoautotrophy and Heterotrophy in Marine Archaea and Bacteria With Single-Cell Multi-isotope NanoSIP

Por Anne E. Dekas, Anne E. Dekas, Alma E. Parada, Alma E. Parada, Xavier Mayali, Jed A. Fuhrman, Jessica Wollard, Peter K. Weber, Jennifer Pett-Ridge
Publicado no Frontiers in Microbiology (2019-12-01)

Stable-Isotope-Informed, Genome-Resolved Metagenomics Uncovers Potential Cross-Kingdom Interactions in Rhizosphere Soil

Por Evan P. Starr, Shengjing Shi, Steven J. Blazewicz, Benjamin J. Koch, Alexander J. Probst, Bruce A. Hungate, Jennifer Pett-Ridge, Mary K. Firestone, Jillian F. Banfield
Publicado no mSphere (2021-10-01)

Active virus-host interactions at sub-freezing temperatures in Arctic peat soil

Por Gareth Trubl, Jeffrey A. Kimbrel, Jose Liquet-Gonzalez, Erin E. Nuccio, Peter K. Weber, Jennifer Pett-Ridge, Janet K. Jansson, Mark P. Waldrop, Steven J. Blazewicz
Publicado no Microbiome (2021-10-01)

Deep-rooted perennials alter microbial respiration and chemical composition of carbon in density fractions along soil depth profiles

Por Kyungjin Min, Erin Nuccio, Eric Slessarev, Megan Kan, Karis J. McFarlane, Erik Oerter, Anna Jurusik, Gregg Sanford, Kurt D Thelen, Jennifer Pett-Ridge, Asmeret Asefaw Berhe
Publicado no Geoderma (2025-03-01)

Light Regimes Shape Utilization of Extracellular Organic C and N in a Cyanobacterial Biofilm

Por Rhona K. Stuart, Xavier Mayali, Amy A. Boaro, Adam Zemla, R. Craig Everroad, Daniel Nilson, Peter K. Weber, Mary Lipton, Brad M. Bebout, Jennifer Pett-Ridge, Michael P. Thelen
Publicado no mBio (2016-07-01)

Successional Trajectories of Rhizosphere Bacterial Communities over Consecutive Seasons

Por Shengjing Shi, Erin Nuccio, Donald J. Herman, Ruud Rijkers, Katerina Estera, Jiabao Li, Ulisses Nunes da Rocha, Zhili He, Jennifer Pett-Ridge, Eoin L. Brodie, Jizhong Zhou, Mary Firestone
Publicado no mBio (2015-09-01)