Bibliotecas PUC-SP - Busca Integrada

A quick guide to large-scale genomic data mining.

od Curtis Huttenhower, Oliver Hofmann
Izdano u PLoS Computational Biology (2010-05-01)

Sensor Fusion for the Robust Detection of Facial Regions of Neonates Using Neural Networks

od Johanna Gleichauf, Lukas Hennemann, Fabian B. Fahlbusch, Oliver Hofmann, Christine Niebler, Alexander Koelpin
Izdano u Sensors (2023-05-01)

Live coverage of scientific conferences using web technologies.

od Allyson L Lister, Ruchira S Datta, Oliver Hofmann, Roland Krause, Michael Kuhn, Bettina Roth, Reinhard Schneider
Izdano u PLoS Computational Biology (2010-01-01)

Live Coverage of Intelligent Systems for Molecular Biology/European Conference on computational biology (ISMB/ECCB) 2009.

od Allyson L Lister, Ruchira S Datta, Oliver Hofmann, Roland Krause, Michael Kuhn, Bettina Roth, Reinhard Schneider
Izdano u PLoS Computational Biology (2010-01-01)

Sequencing of Captive Target Transcripts Identifies the Network of Regulated Genes and Functions of Primate-Specific miR-522

od Shen Mynn Tan, Rory Kirchner, Jingmin Jin, Oliver Hofmann, Larry McReynolds, Winston Hide, Judy Lieberman
Izdano u Cell Reports (2014-08-01)

Stem cell-like gene expression in ovarian cancer predicts type II subtype and prognosis.

od Matthew Schwede, Dimitrios Spentzos, Stefan Bentink, Oliver Hofmann, Benjamin Haibe-Kains, David Harrington, John Quackenbush, Aedín C Culhane
Izdano u PLoS ONE (2013-01-01)

Population differences in transcript-regulator expression quantitative trait loci.

od Pierre R Bushel, Ray McGovern, Liwen Liu, Oliver Hofmann, Ahsan Huda, Jun Lu, Winston Hide, Xihong Lin
Izdano u PLoS ONE (2012-01-01)

EMT-Related Genes Have No Prognostic Relevance in Metastatic Colorectal Cancer as Opposed to Stage II/III: Analysis of the Randomised, Phase III Trial FIRE-3 (AIO KRK 0306; FIRE-3)

od Elise Pretzsch, Volker Heinemann, Sebastian Stintzing, Andreas Bender, Shuo Chen, Julian Walter Holch, Felix Oliver Hofmann, Haoyu Ren, Florian Bösch, Helmut Küchenhoff, Jens Werner, Martin Konrad Angele
Izdano u Cancers (2022-11-01)

Integrating murine gene expression studies to understand obstructive lung disease due to chronic inhaled endotoxin.

od Peggy S Lai, Oliver Hofmann, Rebecca M Baron, Manuela Cernadas, Quanxin Ryan Meng, Herbert S Bresler, David M Brass, Ivana V Yang, David A Schwartz, David C Christiani, Winston Hide
Izdano u PLoS ONE (2013-01-01)

Mice and men: their promoter properties.

od Vladimir B Bajic, Sin Lam Tan, Alan Christoffels, Christian Schönbach, Leonard Lipovich, Liang Yang, Oliver Hofmann, Adele Kruger, Winston Hide, Chikatoshi Kai, Jun Kawai, David A Hume, Piero Carninci, Yoshihide Hayashizaki
Izdano u PLoS Genetics (2006-04-01)

Prioritisation of structural variant calls in cancer genomes

od Miika J. Ahdesmäki, Brad A. Chapman, Pablo Cingolani, Oliver Hofmann, Aleksandr Sidoruk, Zhongwu Lai, Gennadii Zakharov, Mikhail Rodichenko, Mikhail Alperovich, David Jenkins, T. Hedley Carr, Daniel Stetson, Brian Dougherty, J. Carl Barrett, Justin H. Johnson
Izdano u PeerJ (2017-04-01)

Capture of microRNA-bound mRNAs identifies the tumor suppressor miR-34a as a regulator of growth factor signaling.

od Ashish Lal, Marshall P Thomas, Gabriel Altschuler, Francisco Navarro, Elizabeth O'Day, Xiao Ling Li, Carla Concepcion, Yoon-Chi Han, Jerome Thiery, Danielle K Rajani, Aaron Deutsch, Oliver Hofmann, Andrea Ventura, Winston Hide, Judy Lieberman
Izdano u PLoS Genetics (2011-11-01)

Utility of Germline, Somatic and ctDNA Testing in Adults With Cancer

od Emily DeBortoli, Ella McGahan, Tatiane Yanes, Jennifer Berkman, Lauren G. Aoude, Amelia K. Smit, Akira Gokoolparsadh, Azure Hermes, Lyndsay Newett, Mackenzie Bourke, Susan Hanson, Helen Hughes, Oliver Hofmann, Ilias Goranitis, Rebekah McWhirter, Vivienne Milch, Julia Steinberg, Aideen McInerney‐Leo
Izdano u Cancer Medicine (2025-08-01)

Pathologist-initiated whole genome and transcriptome sequencing demonstrates diagnostic utility in resolving difficult-to-diagnose tumors

od Joseph H.A. Vissers, Catherine Mitchell, Owen W. J. Prall, Wing-Yee Lo, Sehrish Kanwal, Stephen J. Luen, Stephen C. Watts, Christopher M. Angel, Christine Khoo, Jia-Min B. Pang, William K. Murray, Cameron Snell, Michael Christie, Richard J. Rebello, Richard W. Tothill, Kym Pham, Oliver Hofmann, Stephen B. Fox, Sean M. Grimmond
Izdano u Genome Medicine (2025-10-01)

A Matched Molecular and Clinical Analysis of the Epithelioid Haemangioendothelioma Cohort in the Stafford Fox Rare Cancer Program and Contextual Literature Review

od Arwa Abdelmogod, Lia Papadopoulos, Stephen Riordan, Melvin Wong, Martin Weltman, Ratana Lim, Christopher McEvoy, Andrew Fellowes, Stephen Fox, Justin Bedő, Jocelyn Penington, Kym Pham, Oliver Hofmann, Joseph H. A. Vissers, Sean Grimmond, Gayanie Ratnayake, Michael Christie, Catherine Mitchell, William K. Murray, Kelly McClymont, Peter Luk, Anthony T. Papenfuss, Damien Kee, Clare L. Scott, David Goldstein, Holly E. Barker
Izdano u Cancers (2023-09-01)

Comparison of illumina and 454 deep sequencing in participants failing raltegravir-based antiretroviral therapy.

od Jonathan Z Li, Brad Chapman, Patrick Charlebois, Oliver Hofmann, Brian Weiner, Alyssa J Porter, Reshmi Samuel, Saran Vardhanabhuti, Lu Zheng, Joseph Eron, Babafemi Taiwo, Michael C Zody, Matthew R Henn, Daniel R Kuritzkes, Winston Hide, ACTG A5262 Study Team, Cara C Wilson, Baiba I Berzins, Edward P Acosta, Barbara Bastow, Peter S Kim, Sarah W Read, Jennifer Janik, Debra S Meres, Michael M Lederman, Lori Mong-Kryspin, Karl E Shaw, Louis G Zimmerman, Randi Leavitt, Guy De La Rosa, Amy Jennings
Izdano u PLoS ONE (2014-01-01)

Multi-omic analysis of SDHB-deficient pheochromocytomas and paragangliomas identifies metastasis and treatment-related molecular profiles

od Aidan Flynn, Andrew D. Pattison, Shiva Balachander, Emma Boehm, Blake Bowen, Trisha Dwight, Fernando J. Rossello, Oliver Hofmann, Luciano Martelotto, Maia Zethoven, Lawrence S. Kirschner, Tobias Else, Lauren Fishbein, Anthony J. Gill, Arthur S. Tischler, Thomas Giordano, Tamara Prodanov, Jane R. Noble, Roger R. Reddel, Alison H. Trainer, Hans Kumar Ghayee, Isabelle Bourdeau, Marianne Elston, Diana Ishak, Joanne Ngeow Yuen Yie, Rodney J. Hicks, Joakim Crona, Tobias Åkerström, Peter Stålberg, Patricia Dahia, Sean Grimmond, Roderick Clifton-Bligh, Karel Pacak, Richard W. Tothill
Izdano u Nature Communications (2025-03-01)

Targeting homologous recombination deficiency in uterine leiomyosarcoma

od Genevieve Dall, Cassandra J. Vandenberg, Ksenija Nesic, Gayanie Ratnayake, Wenying Zhu, Joseph H. A. Vissers, Justin Bedő, Jocelyn Penington, Matthew J. Wakefield, Damien Kee, Amandine Carmagnac, Ratana Lim, Kristy Shield-Artin, Briony Milesi, Amanda Lobley, Elizabeth L. Kyran, Emily O’Grady, Joshua Tram, Warren Zhou, Devindee Nugawela, Kym Pham Stewart, Reece Caldwell, Lia Papadopoulos, Ashley P. Ng, Alexander Dobrovic, Stephen B. Fox, Orla McNally, Jeremy D. Power, Tarek Meniawy, Teng Han Tan, Ian M. Collins, Oliver Klein, Stephen Barnett, Inger Olesen, Anne Hamilton, Oliver Hofmann, Sean Grimmond, Anthony T. Papenfuss, Clare L. Scott, Holly E. Barker
Izdano u Journal of Experimental & Clinical Cancer Research (2023-05-01)

Whole genome sequencing improves tissue-of-origin diagnosis and treatment options for cancer of unknown primary

od Richard J. Rebello, Atara Posner, Ruining Dong, Owen W. J. Prall, Tharani Sivakumaran, Camilla B. Mitchell, Aidan Flynn, Alex Caneborg, Catherine Mitchell, Sehrish Kanwal, Clare Fedele, Samantha Webb, Krista Fisher, Hui-Li Wong, Shiva Balachander, Wenying Zhu, Shannon Nicolson, Voula Dimitriadis, Nicholas Wilcken, Anna DeFazio, Bo Gao, Madhu Singh, Ian M. Collins, Christopher Steer, Mark Warren, Narayan Karanth, Huiling Xu, Andrew Fellowes, Rodney J. Hicks, Kym Pham Stewart, Charles Shale, Peter Priestley, Sarah-Jane Dawson, Joseph H. A. Vissers, Stephen B. Fox, Penelope Schofield, David Bowtell, Oliver Hofmann, Sean M. Grimmond, Linda Mileshkin, Richard W. Tothill
Izdano u Nature Communications (2025-05-01)