Bibliotecas PUC-SP - Busca Integrada

An innate immune signature induced by AS01- or AS03-adjuvanted vaccines predicts the antibody response magnitude and quality consistently over time

av Setareh Tasdighian, Setareh Tasdighian, Viviane Bechtold, Ahmed Essaghir, Yvan Saeys, Yvan Saeys, Wivine Burny
I publikationen Frontiers in Immunology (2024-08-01)

A comprehensive evaluation of module detection methods for gene expression data

av Wouter Saelens, Robrecht Cannoodt, Yvan Saeys
I publikationen Nature Communications (2018-03-01)

Spearheading future omics analyses using dyngen, a multi-modal simulator of single cells

av Robrecht Cannoodt, Wouter Saelens, Louise Deconinck, Yvan Saeys
I publikationen Nature Communications (2021-06-01)

Spotless, a reproducible pipeline for benchmarking cell type deconvolution in spatial transcriptomics

av Chananchida Sang-aram, Robin Browaeys, Ruth Seurinck, Yvan Saeys
I publikationen eLife (2024-05-01)

IncGraph: Incremental graphlet counting for topology optimisation.

av Robrecht Cannoodt, Joeri Ruyssinck, Jan Ramon, Katleen De Preter, Yvan Saeys
I publikationen PLoS ONE (2018-01-01)

Incorporating Topological Priors Into Low-Dimensional Visualizations Through Topological Regularization

av Edith Heiter, Robin Vandaele, Tijl de Bie, Yvan Saeys, Jefrey Lijffijt
I publikationen IEEE Access (2024-01-01)

Identification and Characterization of Multiple Paneth Cell Types in the Mouse Small Intestine

av Steven Timmermans, Charlotte Wallaeys, Natalia Garcia-Gonzalez, Lotte Pollaris, Yvan Saeys, Claude Libert
I publikationen Cells (2024-08-01)

NIMEFI: gene regulatory network inference using multiple ensemble feature importance algorithms.

av Joeri Ruyssinck, Vân Anh Huynh-Thu, Pierre Geurts, Tom Dhaene, Piet Demeester, Yvan Saeys
I publikationen PLoS ONE (2014-01-01)

Data processing workflow for large-scale immune monitoring studies by mass cytometry

av Paulina Rybakowska, Sofie Van Gassen, Katrien Quintelier, Yvan Saeys, Marta E. Alarcón-Riquelme, Concepción Marañón
I publikationen Computational and Structural Biotechnology Journal (2021-01-01)

A Computational Pipeline for the Diagnosis of CVID Patients

av Annelies Emmaneel, Annelies Emmaneel, Delfien J. Bogaert, Delfien J. Bogaert, Sofie Van Gassen, Sofie Van Gassen, Simon J. Tavernier, Simon J. Tavernier, Simon J. Tavernier, Melissa Dullaers, Filomeen Haerynck, Filomeen Haerynck, Yvan Saeys, Yvan Saeys
I publikationen Frontiers in Immunology (2019-08-01)

Protocol for large scale whole blood immune monitoring by mass cytometry and Cyto Quality Pipeline

av Paulina Rybakowska, Sofie Van Gassen, Jordi Martorell Marugán, Katrien Quintelier, Yvan Saeys, Marta E. Alarcón-Riquelme, Concepción Marañón
I publikationen STAR Protocols (2022-12-01)

Asynchronous Processing for Latent Fingerprint Identification on Heterogeneous CPU-GPU Systems

av Andres J. Sanchez-Fernandez, Luis F. Romero, Daniel Peralta, Miguel Angel Medina-Perez, Yvan Saeys, Francisco Herrera, Siham Tabik
I publikationen IEEE Access (2020-01-01)

Trajectory-based differential expression analysis for single-cell sequencing data

av Koen Van den Berge, Hector Roux de Bézieux, Kelly Street, Wouter Saelens, Robrecht Cannoodt, Yvan Saeys, Sandrine Dudoit, Lieven Clement
I publikationen Nature Communications (2020-03-01)

An interactive ImageJ plugin for semi-automated image denoising in electron microscopy

av Joris Roels, Frank Vernaillen, Anna Kremer, Amanda Gonçalves, Jan Aelterman, Hiêp Q. Luong, Bart Goossens, Wilfried Philips, Saskia Lippens, Yvan Saeys
I publikationen Nature Communications (2020-02-01)

Angiogenesis goes computational – The future way forward to discover new angiogenic targets?

av Abhishek Subramanian, Pooya Zakeri, Mira Mousa, Halima Alnaqbi, Fatima Yousif Alshamsi, Leo Bettoni, Ernesto Damiani, Habiba Alsafar, Yvan Saeys, Peter Carmeliet
I publikationen Computational and Structural Biotechnology Journal (2022-01-01)

Essential guidelines for computational method benchmarking

av Lukas M. Weber, Wouter Saelens, Robrecht Cannoodt, Charlotte Soneson, Alexander Hapfelmeier, Paul P. Gardner, Anne-Laure Boulesteix, Yvan Saeys, Mark D. Robinson
I publikationen Genome Biology (2019-06-01)

Nlrp3 inflammasome activation and Gasdermin D-driven pyroptosis are immunopathogenic upon gastrointestinal norovirus infection.

av Hanne Dubois, Frederic Sorgeloos, Soroush T Sarvestani, Liesbet Martens, Yvan Saeys, Jason M Mackenzie, Mohamed Lamkanfi, Geert van Loo, Ian Goodfellow, Andy Wullaert
I publikationen PLoS Pathogens (2019-04-01)

CARD14 Signalling Ensures Cell Survival and Cancer Associated Gene Expression in Prostate Cancer Cells

av Domien Vanneste, Jens Staal, Mira Haegman, Yasmine Driege, Marieke Carels, Elien Van Nuffel, Pieter De Bleser, Yvan Saeys, Rudi Beyaert, Inna S. Afonina
I publikationen Biomedicines (2022-08-01)

Maize specialized metabolome networks reveal organ-preferential mixed glycosides

av Sandrien Desmet, Yvan Saeys, Kevin Verstaen, Rebecca Dauwe, Hoon Kim, Claudiu Niculaes, Atsushi Fukushima, Geert Goeminne, Ruben Vanholme, John Ralph, Wout Boerjan, Kris Morreel
I publikationen Computational and Structural Biotechnology Journal (2021-01-01)

Myocarditis Elicits Dendritic Cell and Monocyte Infiltration in the Heart and Self-Antigen Presentation by Conventional Type 2 Dendritic Cells

av Katrien Van der Borght, Katrien Van der Borght, Charlotte L. Scott, Charlotte L. Scott, Liesbet Martens, Liesbet Martens, Liesbet Martens, Dorine Sichien, Dorine Sichien, Gert Van Isterdael, Gert Van Isterdael, Gert Van Isterdael, Veronika Nindl, Yvan Saeys, Yvan Saeys, Louis Boon, Burkhard Ludewig, Thierry C. Gillebert, Bart N. Lambrecht, Bart N. Lambrecht, Bart N. Lambrecht
I publikationen Frontiers in Immunology (2018-11-01)