Bibliotecas PUC-SP - Busca Integrada

Epigenetic conservation infers that colorectal cancer progenitors retain the phenotypic plasticity of normal colon

מאת Kelly Street, Yifan Zhang, Kimberly Siegmund, Darryl Shibata
הוצא לאור ב Scientific Reports (2025-11-01)

Bioconductor workflow for single-cell RNA sequencing: Normalization, dimensionality reduction, clustering, and lineage inference [version 1; referees: 1 approved, 2 approved with r...

מאת Fanny Perraudeau, Davide Risso, Kelly Street, Elizabeth Purdom, Sandrine Dudoit
הוצא לאור ב F1000Research (2017-07-01)

Trajectory inference across multiple conditions with condiments

מאת Hector Roux de Bézieux, Koen Van den Berge, Kelly Street, Sandrine Dudoit
הוצא לאור ב Nature Communications (2024-01-01)

Urinary Phthalate Metabolites and Biomarkers of Oxidative Stress in a Mexican-American Cohort: Variability in Early and Late Pregnancy

מאת Nina Holland, Karen Huen, Vy Tran, Kelly Street, Brian Nguyen, Asa Bradman, Brenda Eskenazi
הוצא לאור ב Toxics (2016-03-01)

Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics

מאת Kelly Street, Davide Risso, Russell B. Fletcher, Diya Das, John Ngai, Nir Yosef, Elizabeth Purdom, Sandrine Dudoit
הוצא לאור ב BMC Genomics (2018-06-01)

Trajectory-based differential expression analysis for single-cell sequencing data

מאת Koen Van den Berge, Hector Roux de Bézieux, Kelly Street, Wouter Saelens, Robrecht Cannoodt, Yvan Saeys, Sandrine Dudoit, Lieven Clement
הוצא לאור ב Nature Communications (2020-03-01)

Improving replicability in single-cell RNA-Seq cell type discovery with Dune

מאת Hector Roux de Bézieux, Kelly Street, Stephan Fischer, Koen Van den Berge, Rebecca Chance, Davide Risso, Jesse Gillis, John Ngai, Elizabeth Purdom, Sandrine Dudoit
הוצא לאור ב BMC Bioinformatics (2024-05-01)

1017 SLAMF7+ CD8+ exhausted T cell-specific gene signature is associated with resistance to PD1 blockade in renal cell carcinoma

מאת Michael Hurwitz, Elizabeth Plimack, Jeffrey Sosman, Sabina Signoretti, David F McDermott, Michael B Atkins, Naomi B Haas, Hans Hammers, Nicholas Schindler, Opeyemi A Jegede, Catherine J Wu, David Braun, Miya Hugaboom, Kelly Street, Neil Ruthen, Lena Wirth
הוצא לאור ב Journal for ImmunoTherapy of Cancer (2023-11-01)

Attenuated kidney oxidative metabolism in young adults with type 1 diabetes

מאת Ye Ji Choi, Gabriel Richard, Guanshi Zhang, Jeffrey B. Hodgin, Dawit S. Demeke, Yingbao Yang, Jennifer A. Schaub, Ian M. Tamayo, Bhupendra K. Gurung, Abhijit S. Naik, Viji Nair, Carissa Birznieks, Alexis MacDonald, Phoom Narongkiatikhun, Susan Gross, Lynette Driscoll, Maureen Flynn, Kalie Tommerdahl, Kristen J. Nadeau, Viral N. Shah, Tim Vigers, Janet K. Snell-Bergeon, Jessica Kendrick, Daniel H. van Raalte, Lu-Ping Li, Pottumarthi Prasad, Patricia Ladd, Bennett B. Chin, David Z. Cherney, Phillip J. McCown, Fadhl Alakwaa, Edgar A. Otto, Frank C. Brosius, Pierre Jean Saulnier, Victor G. Puelles, Jesse A. Goodrich, Kelly Street, Manjeri A. Venkatachalam, Aaron Ruiz, Ian H. de Boer, Robert G. Nelson, Laura Pyle, Denis P. Blondin, Kumar Sharma, Matthias Kretzler, Petter Bjornstad
הוצא לאור ב The Journal of Clinical Investigation (2024-12-01)